International
Tables for
Crystallography
Volume F
Crystallography of biological macromolecules
Edited by M. G. Rossmann and E. Arnold

International Tables for Crystallography (2006). Vol. F. ch. 22.1, p. 541   | 1 | 2 |

Section 22.1.2.2.8. Extended atoms account for missing hydrogen atoms

M. S. Chapmanb* and M. L. Connollyc

22.1.2.2.8. Extended atoms account for missing hydrogen atoms

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Structures of macromolecules determined by X-ray crystallography rarely reveal the positions of the hydrogen atoms. It is, of course, possible to add explicit hydrogen atoms at the stereochemically most likely positions, but this is rarely done for surface-area calculations. Instead, their average effect is approximately and implicitly accounted for by increasing the heteroatom van der Waals radius by 0.1 to 0.3 Å. (It is not usual to smear atoms to account for thermal motion.)








































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