International
Tables for Crystallography Volume F Crystallography of biological macromolecules Edited by M. G. Rossmann and E. Arnold © International Union of Crystallography 2006 |
International Tables for Crystallography (2006). Vol. F. ch. 25.2, p. 710
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Averaging is performed using a single-step approach (Rossmann et al., 1992), in which every copy of the molecule in a `virtual' asymmetric unit is averaged with every other copy. Density values are obtained at non-grid positions using a 27-point quadratic spectral spline interpolation. A sharpened map is first calculated by dividing by the Fourier transform of the quadratic spline function. The same spline function is then convoluted with the sharpened map to obtain the density value at an arbitrary coordinate (Cowtan & Main, 1998). This approach gives very accurate interpolation from a coarse grid map with relatively little computation and additionally provides gradient information for the refinement of averaging operators.
References
Cowtan, K. D. & Main, P. (1998). Miscellaneous algorithms for density modification. Acta Cryst. D54, 487–493.Google ScholarRossmann, M. G., McKenna, R., Tong, L., Xia, D., Dai, J.-B., Wu, H., Choi, H.-K. & Lynch, R. E. (1992). Molecular replacement real-space averaging. J. Appl. Cryst. 25, 166–180.Google Scholar