International Tables for Crystallography (2012). Vol. F, ch. 19.9, pp. 624-628
doi: 10.1107/97809553602060000875

Chapter 19.9. Four-dimensional cryo-electron microscopy at quasi-atomic resolution: IMAGIC 4D

Contents

  • 19.9. Four-dimensional cryo-electron microscopy at quasi-atomic resolution: IMAGIC 4D   (pp. 624-628) | html | pdf | chapter contents |
    • 19.9.1. Introduction  (p. 624) | html | pdf |
    • 19.9.2. The IMAGIC software system  (p. 624) | html | pdf |
    • 19.9.3. IMAGIC `4D' processing/data format  (pp. 624-625) | html | pdf |
    • 19.9.4. Software parallelization  (p. 625) | html | pdf |
    • 19.9.5. Full 2D (parallel) astigmatic contrast transfer function correction  (p. 625) | html | pdf |
    • 19.9.6. Parallel automatic particle picking  (p. 625) | html | pdf |
    • 19.9.7. Parallel multi-reference alignments and reference bias  (p. 626) | html | pdf |
    • 19.9.8. MSA and its parallelization  (p. 626) | html | pdf |
    • 19.9.9. Handling multiple 3D reconstructions in parallel  (pp. 626-627) | html | pdf |
    • 19.9.10. Angular reconstitution 4D refinements  (p. 627) | html | pdf |
    • 19.9.11. Discussion  (p. 627) | html | pdf |
    • References | html | pdf |
    • Figures
      • Fig. 19.9.3.1. IMAGIC 4D file format  (p. 625) | html | pdf |
      • Fig. 19.9.7.1. One starts with the ( a priori ) assignment of the images in a stack (original images or class averages) to a number of 3D volumes (named 3D-1 to 3D-3)  (p. 626) | html | pdf |