Building a structure-determination data pipeline
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.3.3,
p.
[ doi:10.1107/97809553602060000755 ]
of mmCIF architecture for PDB data management
One goal of high-throughput structural genomics is the automatic capture of all the details of each step in the process of structure determination. Fig.
5.5.3.5 shows a simplified ...
Generalized database support
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.3.2,
p.
[ doi:10.1107/97809553602060000755 ]
database schemata and extracts the processed data required to load database instances. The relation of the database loader to the central components of the ADIT system is shown in Fig.
5.5.3.4 .
Figure
5.5.3.4
| top ...
Integrated data-processing system: overview
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.3,
p.
[ doi:10.1107/97809553602060000755 ]
processing system developed to support deposition, data processing and annotation of three-dimensional macromolecular structure data.
This system, which is outlined in Fig.
5.5.3.1, accepts experimental and structural data from a user for deposition ...
ADIT: functional description
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.3.1,
p.
[ doi:10.1107/97809553602060000755 ]
of mmCIF architecture for PDB data management
The basic functions of the ADIT deposition system are shown in Fig.
5.5.3.2 . Users interact with the ADIT system through a web server. The CGI components of the ADIT system ...
