Websites
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.2,
p.
[ doi:10.1107/97809553602060000896 ]
Kinjo, A. R. &
Nakamura,
H. (2009). Comprehensive structural classification of ligand-binding motifs in proteins . Structure, 17, 234–246. Google Scholar
Kinoshita, K. &
Nakamura,
H. (2004). eF-site and PDBjViewer: database ...
ftp
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.1,
p.
[ doi:10.1107/97809553602060000896 ]
for Crystallography, Vol. G, Definition and Exchange of Crystallographic Data, edited by S. R. Hall & B. McMahon, pp. 195–198. Dordrecht: Springer. Google Scholar
Westbrook, J., Ito, N.,
Nakamura,
H., Henrick, K. & Berman, H. M. (2005). PDBML ...
Data access
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3,
p.
[ doi:10.1107/97809553602060000896 ]
Scholar
Golovin, A. & Henrick, K. (2008). Msdmotif: exploring protein sites and motifs . BMC Bioinformatics, 9, 312. Google Scholar
Kinjo, A. R. &
Nakamura,
H. (2009). Comprehensive structural classification of ligand-binding ...
BMRB
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.2.4,
p.
[ doi:10.1107/97809553602060000896 ]
Scholar
Markley, J. L., Ulrich, E. L., Berman, H. M., Henrick, K.,
Nakamura,
H. & Akutsu, H. (2008). BioMagResBank (BMRB) as a partner in the Worldwide Protein Data Bank (wwPDB): new policies affecting biomolecular NMR depositions . J. Biomol ...
RCSB PDB
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.2.1,
p.
[ doi:10.1107/97809553602060000896 ]
...
PDBj
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.2.2,
p.
[ doi:10.1107/97809553602060000896 ]
sites, for analyses of the molecular-recognition mechanisms. eF-seek is a service to search for similar molecular surfaces among known active sites.
References
Kinjo, A. R. &
Nakamura,
H. (2009). Comprehensive structural ...
PDBe
Berman, H.M.,
Henrick, K.,
Kleywegt, G.,
Nakamura, H. and
Markley, J.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.1.3.2.3,
p.
[ doi:10.1107/97809553602060000896 ]
...
