International
Tables for
Crystallography
Volume F
Crystallography of biological macromolecules
Edited by M. G. Rossmann and E. Arnold

International Tables for Crystallography (2006). Vol. F. ch. 11.4, p. 230   | 1 | 2 |

Section 11.4.5.6. Active area

Z. Otwinowskia* and W. Minorb

a UT Southwestern Medical Center at Dallas, 5323 Harry Hines Boulevard, Dallas, TX 75390-9038, USA, and bDepartment of Molecular Physiology and Biological Physics, University of Virginia, 1300 Jefferson Park Avenue, Charlottesville, VA 22908, USA
Correspondence e-mail:  zbyszek@mix.swmed.edu

11.4.5.6. Active area

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Not every pixel represents a valid measurement. Specification of the active detector area in DENZO is derived from the format and the definition of the detector size. Detector calibration with flood-field exposure will calculate the sensitivity for each pixel and will also determine which pixels should be ignored. The input command can additionally label some areas of the detector to be ignored, most frequently the shadow caused by the beam stop and its support. To define the shape of the area shadowed by the beam stop, the useful commands are ignore circle and ignore quadrilateral. There are also commands to ignore triangular shapes, margins of the detector and a particular line or pixel.








































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