Tables for
Volume G
Definition and exchange of crystallographic data
Edited by S. R. Hall and B. McMahon

International Tables for Crystallography (2006). Vol. G. ch. 5.2, pp. 488-498

Chapter 5.2. STAR File utilities

N. Spadaccini,a* S. R. Hallb and B. McMahonc

aSchool of Computer Science and Software Engineering, University of Western Australia, 35 Stirling Highway, Crawley, Perth, WA 6009, Australia,bSchool of Biomedical and Chemical Sciences, University of Western Australia, Crawley, Perth, WA 6009, Australia, and cInternational Union of Crystallography, 5 Abbey Square, Chester CH1 2HU, England
Correspondence e-mail:


First citationBerman, H. M., Battistuz, T., Bhat, T. N., Bluhm, W. F., Bourne, P. E., Burkhardt, K., Feng, Z., Gilliland, G. L., Iype, L., Jain, S., Fagan, P., Marvin, J., Padilla, D., Ravichandran, V., Schneider, B., Thanki, N., Weissig, H., Westbrook, J. D. & Zardecki, C. (2002). The Protein Data Bank. Acta Cryst. D58, 899–907.Google Scholar
First citationBerman, H. M., Westbrook, J., Feng, Z., Iype, L., Schneider, B. & Zardecki, C. (2002). The Nucleic Acid Database. Acta Cryst. D58, 889–898.Google Scholar
First citationBioMagResBank (2004). NMR-STAR Dictionary. Version 3.0. (Under development.) .Google Scholar
First citationChang, W. & Bourne, P. E. (1998). CIF applications. IX. A new approach for representing and manipulating STAR files. J. Appl. Cryst. 31, 505–509.Google Scholar
First citationKnuth, D. E. (1973). The art of computer programming. Vol. 3, Sorting and searching, pp. 422–447. Reading, MA: Addison-Wesley.Google Scholar
First citationLinge, J. P., Nilges, M. & Ehrlich, L. (1999). StarDOM: from STAR format to XML. J. Biomol. NMR, 15, 169–172.Google Scholar
First citationMurray-Rust, P. (1993). Analysis of the DDL/dictionary parsing problem. Proc. First Macromolecular Crystallographic Information File (CIF) Tools Workshop, ch. 12. New York: Columbia University.Google Scholar
First citationMurray-Rust, P. (1998). The globalization of crystallographic knowledge. Acta Cryst. D54, 1065–1070.Google Scholar
First citationPinson, L. J. & Richard, R. S. (1991). Objective-C object-oriented programming techniques. Reading, MA: Addison-Wesley.Google Scholar
First citationRobie, J., Lapp, J. & Schach, D. (1998). XML Query Language (XQL). .Google Scholar
First citationSchirripa, S. & Westbrook, J. D. (1996). CIFOBJ. A class library of mmCIF access tools. Version 3.01 reference guide. Technical Report NDB-269. Rutgers University, New Brunswick, New Jersey, USA.Google Scholar
First citationSpadaccini, N. & Hall, S. R. (1994). Star_Base: accessing STAR File data. J. Chem. Inf. Comput. Sci. 34, 509–516.Google Scholar
First citationSpadaccini, N., Hall, S. R. & Castleden, I. R. (2000). Relational expressions in STAR File dictionaries. J. Chem. Inf. Comput. Sci. 40, 1289–1301.Google Scholar
First citationUlrich, E. L., Markley, J. L. & Kyogoku, Y. (1989). Creation of a nuclear magnetic resonance data repository and literature database. Protein Seq. Data Anal. 2, 23–37.Google Scholar
First citationW3C (2004). Document Object Model (DOM). .Google Scholar
First citationWestbrook, J. D., Hsieh, S.-H. & Fitzgerald, P. M. D. (1997). CIF applications. VI. CIFLIB: an application program interface to CIF dictionaries and data files. J. Appl. Cryst. 30, 79–83. Google Scholar