mmLib.Extensions.CCP4Library.CCP4Library

Package mmLib :: Package Extensions :: Module CCP4Library :: Class CCP4Library

[show private | hide private]

Class CCP4Library

      object --+        
               |        
LibraryInterface --+    
                   |    
             Library --+
                       |
                      CCP4Library

Method Summary
	`__init__(self, ccp4_root)`
	`__getitem__(self, key)`
	`load_monomer(self, name, mon)` Locates and reads the mmCIF monomer description found in the CCP4 monomer dictionary.
Inherited from Library
	`get_element(self, symbol)` Loads and caches a instance of the Element class for the given element symbol.
	`get_monomer(self, res_name)` Loads and caches the monomer description.
	`is_amino_acid(self, res_name)` Returns True if the monomer defined by the 3 letter code res_name is a L-amino acid, otherwise returns False.
	`is_nucleic_acid(self, res_name)` Returns True if the monomer defined by res_name is a nucleic acid, otherwise returns False.
	`is_water(self, res_name)` Returns True if the 3 letter code res_name is one of the synonyms for water, otherwise returns False.
Inherited from LibraryInterface
	`is_standard_residue(self, res_name)`
Inherited from object
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)
Inherited from type
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T

Method Details

load_monomer(self, name, mon)

Locates and reads the mmCIF monomer description found in the CCP4 monomer dictionary.

Generated by Epydoc 2.0 on Wed Nov 24 17:34:57 2004

http://epydoc.sf.net