mmLib.Library.LibraryInterface

Package mmLib :: Module Library :: Class LibraryInterface

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Class LibraryInterface

object --+
         |
        LibraryInterface

The public interface for implementing new Library classes

Method Summary
	`get_element(self, symbol)` Return the corresponding Element description instance for the given element symbol.
	`get_monomer(self, res_name)` Returns the Monomer class instance for the monomer defined by the 3 letter code res_name.
	`is_amino_acid(self, res_name)` Returns True if the monomer defined by the 3 letter code res_name is a L-amino acid, otherwise returns False.
	`is_nucleic_acid(self, res_name)` Returns True if the monomer defined by res_name is a nucleic acid, otherwise returns False.
	`is_standard_residue(self, res_name)`
	`is_water(self, res_name)` Returns True if the 3 letter code res_name is one of the synonyms for water, otherwise returns False.
Inherited from object
	`__init__(...)` x.__init__(...) initializes x; see x.__class__.__doc__ for signature
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)
Inherited from type
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T

Method Details

Return the corresponding Element description instance for the given element symbol. Returns None if no description is found.

Returns the Monomer class instance for the monomer defined by the 3 letter code res_name. Returns None if no description is found.

Returns True if the monomer defined by the 3 letter code res_name is a L-amino acid, otherwise returns False.

Returns True if the monomer defined by res_name is a nucleic acid, otherwise returns False.

Returns True if the 3 letter code res_name is one of the synonyms for water, otherwise returns False.

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