Detection of errors in protein models
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
ch. 21.3,
pp. 677-683
[ doi:10.1107/97809553602060000881 ]
was supported by grants NIH GM 31299, DOE DE-FG03–87ER60615 and NSF MCB 9420769.
References
Bennett, M. J., Choe, S. &
Eisenberg,
D. (1994). Domain swapping: entangling alliances between proteins . Proc. Natl Acad. Sci. USA, 91 ...
Selection of database
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.4,
pp. 679-679
[ doi:10.1107/97809553602060000881 ]
Motivation and introduction
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.1,
pp. 677-677
[ doi:10.1107/97809553602060000881 ]
are independent of the refinement function.
References
Bowie, J. U., Lüthy, R. &
Eisenberg,
D. (1991). A method to identify protein sequences that fold into a known three-dimensional structure . Science, 253, 164–170 ...
Specific examples
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.5.1,
pp. 679-682
[ doi:10.1107/97809553602060000881 ]
S. &
Eisenberg,
D. (1994). Domain swapping: entangling alliances between proteins . Proc. Natl Acad. Sci. USA, 91, 3127–3131. Google Scholar
Brzozowski, A. M., Derewenda, U., Derewenda, Z. S., Dodson, G. G., Lawson, D. M ...
[
more
results from section 21.3.5 in volume F]
ERRAT
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.3.4,
pp. 678-679
[ doi:10.1107/97809553602060000881 ]
[
more
results from section 21.3.3 in volume F]
Availability of software
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.7,
pp. 682-682
[ doi:10.1107/97809553602060000881 ]
S. &
Eisenberg,
D. (1994). Domain swapping: entangling alliances between proteins . Proc. Natl Acad. Sci. USA, 91, 3127–3131. Google Scholar
International Tables for Crystallography (2012). Vol. F. ch. 21.3, p. 682
© ...
Summary
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.6,
pp. 682-682
[ doi:10.1107/97809553602060000881 ]
Separating evaluation from refinement
Dym, O.,
Eisenberg, D. and
Yeates, T. O.,
International Tables for Crystallography
(2012).
Vol. F,
Section 21.3.2,
pp. 677-677
[ doi:10.1107/97809553602060000881 ]
