ARP/wARP – automated model building and refinement
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
ch. 18.8,
pp. 525-528
[ doi:10.1107/97809553602060000862 ]
Parthasarathy, V.,
Lamzin,
V. S., Kleywegt, G. J. & Perrakis, A. (2004). Towards complete validated models in the next generation of ARP/wARP. Acta Cryst. D 60, 2222–2229. Google Scholar
Evrard, G. X., Langer, G. G., Perrakis, A. &
Lamzin,
V ...
Applicability and requirements
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.5,
pp. 528-528
[ doi:10.1107/97809553602060000862 ]
Iterative protein-model building
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.3.1,
pp. 526-527
[ doi:10.1107/97809553602060000862 ]
References
Cohen, S. X., Morris, R. J., Fernandez, F. J., Ben Jelloul, M., Kakaris, M., Parthasarathy, V.,
Lamzin,
V. S., Kleywegt, G. J. & Perrakis, A. (2004). Towards complete validated models in the next generation of ARP/wARP. Acta Cryst. D ...
[
more
results from section 18.8.3 in volume F]
Iterations
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.4,
pp. 528-528
[ doi:10.1107/97809553602060000862 ]
Refinement and model building are two parts of modelling a structure
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.1,
pp. 525-525
[ doi:10.1107/97809553602060000862 ]
are the amount of the available X-ray data (resolution) and the quality of the initial phase estimates.
References
Lamzin,
V. S. & Wilson, K. S. (1993). Automated refinement of protein models. Acta Cryst. D 49, 129–147. Google ...
Free-atom and hybrid models
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.2,
pp. 525-526
[ doi:10.1107/97809553602060000862 ]
Agarwal, R. C. & Isaacs, G. (1977). Method for obtaining a high resolution protein map starting from a low resolution map. Proc. Natl Acad. Sci. USA, 74, 2835–2839. Google Scholar
Lamzin,
V. S. & Wilson, K. S. (1997). Automated ...
