ARP/wARP – automated model building and refinement
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
ch. 18.8,
pp. 525-528
[ doi:10.1107/97809553602060000862 ]
density maps and geometrical assumptions, is required to enable improvement of the model to proceed.
ARP/wARP has built on two innovative concepts (Lamzin & Wilson, 1993, 1997 ;
Perrakis et al., 1999).
(1 ...
Applicability and requirements
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.5,
pp. 528-528
[ doi:10.1107/97809553602060000862 ]
Iterative protein-model building
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.3.1,
pp. 526-527
[ doi:10.1107/97809553602060000862 ]
References
Cohen, S. X., Morris, R. J., Fernandez, F. J., Ben Jelloul, M., Kakaris, M., Parthasarathy, V., Lamzin, V. S., Kleywegt, G. J. &
Perrakis, A. (2004). Towards complete validated models in the next generation of ARP/wARP. Acta Cryst. D ...
[
more
results from section 18.8.3 in volume F]
Iterations
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.4,
pp. 528-528
[ doi:10.1107/97809553602060000862 ]
Refinement and model building are two parts of modelling a structure
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.1,
pp. 525-525
[ doi:10.1107/97809553602060000862 ]
ARP/wARP has built on two innovative concepts (Lamzin & Wilson, 1993, 1997 ;
Perrakis et al., 1999).
(1) It challenged the previous separation of model building and refinement software by taking a more general view ...
Free-atom and hybrid models
Lamzin, V. S.,
Perrakis, A. and
Wilson, K. S.,
International Tables for Crystallography
(2012).
Vol. F,
Section 18.8.2,
pp. 525-526
[ doi:10.1107/97809553602060000862 ]
