The use of mmCIF architecture for PDB data management
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
ch. 5.5,
pp. 539-543
[ doi:10.1107/97809553602060000755 ]
PDB format
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.2.1,
pp. 539-539
[ doi:10.1107/97809553602060000755 ]
[
more
results from section 5.5.2 in volume G]
Building a structure-determination data pipeline
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.3.3,
pp. 542-543
[ doi:10.1107/97809553602060000755 ]
[
more
results from section 5.5.3 in volume G]
Access
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.4,
pp. 543-543
[ doi:10.1107/97809553602060000755 ]
Introduction
Westbrook, J. D.,
Yang, H.,
Feng, Z. and
Berman, H. M.,
International Tables for Crystallography
(2006).
Vol. G,
Section 5.5.1,
pp. 539-539
[ doi:10.1107/97809553602060000755 ]
The Nucleic Acid Database
Schneider, B.,
de la Cruz, J.,
Dutta, S.,
Feng, Z.,
Chen, L.,
Westbrook, J.,
Yang, H.,
Young, J.,
Zardecki, C. and
Berman, H.M.,
International Tables for Crystallography
(2012).
Vol. F,
ch. 24.2,
pp. 833-837
[ doi:10.1107/97809553602060000897 ]
Saenger, W. (1984). Principles of Nucleic Acid Structure . New York: Springer-Verlag. Google Scholar
Schneider, B., de la Cruz, J., Feng, Z., Chen, L., Westbrook, J.,
Yang,
H., Young, J., Zardecki, C. & Berman, H. M. (2009). Structural ...
Information content of the NDB
Schneider, B.,
de la Cruz, J.,
Dutta, S.,
Feng, Z.,
Chen, L.,
Westbrook, J.,
Yang, H.,
Young, J.,
Zardecki, C. and
Berman, H.M.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.2.3.1,
pp. 834-834
[ doi:10.1107/97809553602060000897 ]
[
more
results from section 24.2.3 in volume F]
Standards and software tools
Schneider, B.,
de la Cruz, J.,
Dutta, S.,
Feng, Z.,
Chen, L.,
Westbrook, J.,
Yang, H.,
Young, J.,
Zardecki, C. and
Berman, H.M.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.2.4.2,
pp. 835-835
[ doi:10.1107/97809553602060000897 ]
Scholar
Yang,
H., Jossinet, F., Leontis, N., Chen, L., Westbrook, J., Berman, H. M. & Westhof, E. (2003). Tools for the automatic identification and classification of RNA base pairs . Nucleic Acids Res. 31, 3450–3460. Google Scholar ...
[
more
results from section 24.2.4 in volume F]
Data processing and validation
Schneider, B.,
de la Cruz, J.,
Dutta, S.,
Feng, Z.,
Chen, L.,
Westbrook, J.,
Yang, H.,
Young, J.,
Zardecki, C. and
Berman, H.M.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.2.2,
pp. 833-834
[ doi:10.1107/97809553602060000897 ]
55, 191–205. Google Scholar
Westbrook, J., Feng, Z., Burkhardt, K. & Berman, H. M. (2003). The Protein Data Bank . Nucleic Acids Res. 28, 235–242. Google Scholar
Westbrook, J.,
Yang,
H., Feng, Z. & Berman, H. M. (2005 ...
Introduction
Schneider, B.,
de la Cruz, J.,
Dutta, S.,
Feng, Z.,
Chen, L.,
Westbrook, J.,
Yang, H.,
Young, J.,
Zardecki, C. and
Berman, H.M.,
International Tables for Crystallography
(2012).
Vol. F,
Section 24.2.1,
pp. 833-833
[ doi:10.1107/97809553602060000897 ]
