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Results for DC.creator="T." AND DC.creator="O." AND DC.creator="Yeates" in section 21.3.3 of volume F |
ERRAT
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.4, pp. 678-679 [ doi:10.1107/97809553602060000881 ]
ERRAT 21.3.3.4. ERRAT The program ERRAT (Colovos & Yeates, 1993) analyses the relative frequencies of noncovalent interactions between atoms ... level. Three types of atoms are considered (C, N and O), and consequently six types of interactions are possible (CC, CN ... identifying incorrectly built regions in protein models. References Colovos, C. & Yeates, T. O. (1993). Verification of protein structures: patterns ...
VERIFY3D
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.3, p. 678 [ doi:10.1107/97809553602060000881 ]
... the side-chain area that is covered by polar atoms (O and N), and the local secondary structure. The 3D profile ...
WHAT IF
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.2, p. 678 [ doi:10.1107/97809553602060000881 ]
WHAT IF 21.3.3.2. WHAT IF The molecular modelling and drug design program WHAT IF (Vriend, 1990) performs a large number of geometrical checks, comparing a proposed protein model to a set of canonical distances and angles. These parameters include bond lengths and bond angles, side-chain planarity, torsion angles, interatomic distances ...
PROCHECK
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.1, pp. 677-678 [ doi:10.1107/97809553602060000881 ]
PROCHECK 21.3.3.1. PROCHECK The PROCHECK (Laskowski et al., 1993) suite of programs compares the stereochemistry of a proposed protein model to stereochemical features of known structures. The program provides an assessment of the overall quality of the model by comparing the model with well refined structures of the same resolution, and ...
Algorithms for the detection of errors in protein models and the types of errors they detect
International Tables for Crystallography (2012). Vol. F, Section 21.3.3, pp. 677-679 [ doi:10.1107/97809553602060000881 ]
... the side-chain area that is covered by polar atoms (O and N), and the local secondary structure. The 3D profile ... its amino-acid sequence. 21.3.3.4. ERRAT | | The program ERRAT (Colovos & Yeates, 1993) analyses the relative frequencies of noncovalent interactions between atoms ... level. Three types of atoms are considered (C, N and O), and consequently six types of interactions are possible (CC, ...
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.4, pp. 678-679 [ doi:10.1107/97809553602060000881 ]
ERRAT 21.3.3.4. ERRAT The program ERRAT (Colovos & Yeates, 1993) analyses the relative frequencies of noncovalent interactions between atoms ... level. Three types of atoms are considered (C, N and O), and consequently six types of interactions are possible (CC, CN ... identifying incorrectly built regions in protein models. References Colovos, C. & Yeates, T. O. (1993). Verification of protein structures: patterns ...
VERIFY3D
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.3, p. 678 [ doi:10.1107/97809553602060000881 ]
... the side-chain area that is covered by polar atoms (O and N), and the local secondary structure. The 3D profile ...
WHAT IF
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.2, p. 678 [ doi:10.1107/97809553602060000881 ]
WHAT IF 21.3.3.2. WHAT IF The molecular modelling and drug design program WHAT IF (Vriend, 1990) performs a large number of geometrical checks, comparing a proposed protein model to a set of canonical distances and angles. These parameters include bond lengths and bond angles, side-chain planarity, torsion angles, interatomic distances ...
PROCHECK
International Tables for Crystallography (2012). Vol. F, Section 21.3.3.1, pp. 677-678 [ doi:10.1107/97809553602060000881 ]
PROCHECK 21.3.3.1. PROCHECK The PROCHECK (Laskowski et al., 1993) suite of programs compares the stereochemistry of a proposed protein model to stereochemical features of known structures. The program provides an assessment of the overall quality of the model by comparing the model with well refined structures of the same resolution, and ...
Algorithms for the detection of errors in protein models and the types of errors they detect
International Tables for Crystallography (2012). Vol. F, Section 21.3.3, pp. 677-679 [ doi:10.1107/97809553602060000881 ]
... the side-chain area that is covered by polar atoms (O and N), and the local secondary structure. The 3D profile ... its amino-acid sequence. 21.3.3.4. ERRAT | | The program ERRAT (Colovos & Yeates, 1993) analyses the relative frequencies of noncovalent interactions between atoms ... level. Three types of atoms are considered (C, N and O), and consequently six types of interactions are possible (CC, ...
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